The bioinformatics home for fast, well-documented, and user-friendly tools

Welcome to CrocoTools. We provide bioinformatics webservers and standalone software to analyze the sequence, structure, and function of the molecules of life. We are committed to providing high-quality, user-friendly, computationally efficient bioinformatics tools, taking upon ourselves the challenge of making scientific software accessible to our peers across various fields of life and medical sciences. We hope you enjoy using CrocoTools in your research. If you do not find a suitable CrocoTool or would like to turn your scripts into a CrocoTool, we’d love to hear from you.

CrocoBLAST: Running BLAST efficiently in the age of next-generation sequencing. Tristão Ramos et al., Bioinformatics 2017;33(22):3648-3651.
CrocoPhylogeny: Web-based phylogenetic analysis of whole genomes and complex sequences in just three clicks. Tristão Ramos et al., under preparation.
The evolutionary advantage of toxin production among cyanobacteria, the oldest known organisms on Earth. Tristão Ramos et al., doi: 10.1101/615542v1
Charge-perturbation dynamics — a new avenue towards in silico protein folding. Pant et al., doi: 10.1101/597039v1